deep learning

At UGA you can run AlphaFold on two platforms, GACRC and COLAB. The code on GACRC might be closer to the original one released by Deepmind. The COLAB one made the ‘sequence alignment’ step quicker with potentially reduced accuracy. The good news is that the results from both of them look the same to my eyes. After getting the results, just use software like PyMol to open the .pdb file to visualize the 3D model....

Docker is almost a standard for publishing any new software or package. There is a platform called PlantIT that can help you deploy any service in the container image. Let’s learn how to put a deep learning based plant phenotyping package into container and deploy it to PlantIT. Transcript: Welcome to the video. In this tutorial, I am going to show you how to build a container for a deep learning model and run it on PlantIT in less than 10 minutes....